Basic Genomic Analyses

Differential gene expression analysis (all data assayed on Affy U133 Plus 2.0 arrays)

Contrast	Epithelial brushing	Biopsy homogenates	Alveolar macrophages
Healthy vs Steroid Naive Asthma	27 healthy controls vs 41 steroid-naive asthmatics w/ 31 paired post-steroid Click to download: DE table for top 1K genes (same as GSE4302 dataset)	15 healthy controls vs 32 steroid-naive asthmatics w/ 31paired post-steroid Click to download: DE table for top 1K genes (similar to GSE23611 dataset)	15 healthy vs 17 steroid-naive asthmatics Click to download: DE table for top 1K genes (similar to GSE2125 dataset)
Healthy vs Smoker	Click here to download the plots for: 15 Health vs 15 Smoke

microRNA differential expression analysis (ADMIRE) (data assayed on custom Agilent arrays)

Click here to download the plots: Top 217 DE miRNAs